Method 1:
Grant the Site Server computer account full control permission on the System container in Active Directory Domain Services. (This method is not recommended. It is more secure to create the System Management Container manually)
Method 2:
Manually create the System Management container in Active Directory Domain Services using ADSIEdit. ADSIEdit is part of Windows Server Support Tools. Windows Server Support Tools can be found in Windows 2000 Server or Windows 2003 Server CD.
1. Install Windows Server Support Tools.
2. Open ADSIEdit snap-in using MMC, and connect to domain which you would like to create the System Management Container.
3. In the console pane, expand Domain [computer fully qualified domain name], expand
4. In the Create Object dialog box, select Container and click Next.
5. In the Value field, type System Management and click Next, and then click Finish.
Now, your Site Server is able to publish site information in the Active Directory once the System Management container is created.